QUARK Ab Initio Results for PGAD_ECOLI

Submitted Primary Sequence

>Length 137
MNNLIITTRQSPVRLLVDYVATTILWTLFALFIFLFAMDLLTGYYWQSEARSRLQFYFLLAVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEYAESLAIPDELYQQLQKSHRMSVHFTSQGQIKMVVSEKALVRA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNNLIITTRQSPVRLLVDYVATTILWTLFALFIFLFAMDLLTGYYWQSEARSRLQFYFLLAVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEYAESLAIPDELYQQLQKSHRMSVHFTSQGQIKMVVSEKALVRA
TTTTEEETTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHHHHHHHCTTTTTTCHHHHHHHCCCCHHHHHHHHHCCEEEEEETTTTCEEEEEEHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNNLIITTRQSPVRLLVDYVATTILWTLFALFIFLFAMDLLTGYYWQSEARSRLQFYFLLAVANAVVLIVWALYNKLRFQKQQHHAAYQYTPQEYAESLAIPDELYQQLQKSHRMSVHFTSQGQIKMVVSEKALVRA
54211012231213100200010000000000000000100001102220221111100000021000000011110212123222222111310042131232003102512100001143120100012312244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.538 to 1usdA SCOP code=h.1.29.1	TM-score=0.601 to 1rw6A SCOP code=a.47.4.1	TM-score=0.536 to 1h2sB SCOP code=f.17.4.1	TM-score=0.538 to 1rw6A SCOP code=a.47.4.1	TM-score=0.603 to 1lrzA SCOP code=a.2.7.4

Estimated TM-score of Model 1: 0.3853 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4259 ±0.0778