QUARK Ab Initio Results for YBDJ_ECOLI


  Submitted Primary Sequence

>Length 82
MKHPLETLTTAAGILLMAFLSCLLLPAPALGLALAQKLVTMFHLMDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKHPLETLTTAAGILLMAFLSCLLLPAPALGLALAQKLVTMFHLMDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD
CCCCHHHHHHHHHHHHHHHHHHHHCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKHPLETLTTAAGILLMAFLSCLLLPAPALGLALAQKLVTMFHLMDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD
5512132111000000000000111211110000012001001011011000000000000000010000000022002234
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.568 to 1xvhA
SCOP code=a.8.1.2
TM-score=0.611 to 1r4gA
SCOP code=a.8.5.1
TM-score=0.663 to 1gntA
SCOP code=e.26.1.1
TM-score=0.571 to 1xvhA
SCOP code=a.8.1.2
TM-score=0.569 to 1ss1A
SCOP code=a.8.1.1
Estimated TM-score of Model 1: 0.4828 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5302 ±0.0778