QUARK Ab Initio Results for YCEQ_ECOLI


  Submitted Primary Sequence

>Length 106
MSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFFTSCW
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFFTSCW
CCEEEEETTTTHHHCCCTTTTTTTTTTTTTTTTTTTCHHHHHHHHHHHHHHCTTTTTTTTTTEEEEEEEETTTTCCEEEEETTTTTTTTTEETTTTTTHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSVARFSCGKTAQLSKKQTGYYSPEIFPSTGKDCNPQPANCLKDQYVLRHCCVDDRSGKMGYSVKFLVLTRMDTETASLFHCKPCYSKMTFTIYHPLTHSFFTSCW
4411002013202124322222123201221330222122001110001200133322320110100000213232110020320222010101011112012203
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.477 to 2ywqC
SCOP code=d.204.1.1		 TM-score=0.469 to 1f02I
SCOP code=b.1.14.1		 TM-score=0.447 to 2fblB
SCOP code=d.63.1.2		 TM-score=0.449 to 1zq7B
SCOP code=d.309.1.1		 TM-score=0.494 to 2amhA
SCOP code=c.51.4.2
Estimated TM-score of Model 1: 0.2726 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3053 ±0.0778