QUARK Ab Initio Results for YDAC_ECOLI


  Submitted Primary Sequence

>Length 69
MYKITATIEKEGGTPTNWTRYSKSKLTKSECEKMLSGKKEAGVSREQKVKLINFNCEKLQSSRIALYSN
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--------10--------20--------30--------40--------50--------60
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MYKITATIEKEGGTPTNWTRYSKSKLTKSECEKMLSGKKEAGVSREQKVKLINFNCEKLQSSRIALYSN
CCEEEEEEETTTTTTTTTEETTTTCCCHHHHHHHTTTTTCCCCEEEEEEEEEEEEEEEEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MYKITATIEKEGGTPTNWTRYSKSKLTKSECEKMLSGKKEAGVSREQKVKLINFNCEKLQSSRIALYSN
431020112232212120010242312321023112334322212222020120201202112000236
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--------10--------20--------30--------40--------50--------60
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.462 to 2q41A
SCOP code=c.66.1.17
TM-score=0.496 to 2jovA
SCOP code=d.349.1.1
TM-score=0.539 to 2ijrA
SCOP code=e.66.1.1
TM-score=0.509 to 2awbV
SCOP code=b.53.1.1
TM-score=0.611 to 1bmlC
SCOP code=d.15.5.1
Estimated TM-score of Model 1: 0.3461 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3840 ±0.0778