QUARK Ab Initio Results for YDHI_ECOLI


  Submitted Primary Sequence

>Length 78
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW
123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW
CEEEETTTTTTHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTHHHHHHHHHHHHHHHHHHHHHHHC
123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLLRGWIYAGDIWHPLLMDLSLFAICVCLALAILIAW
321121222110210010021100100100000000000001001000120200010000000000000000001122
123456789012345678901234567890123456789012345678901234567890123456789012345678
--------10--------20--------30--------40--------50--------60--------70
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.627 to 2pmrA
SCOP code=a.8.11.1
TM-score=0.603 to 1k30A
SCOP code=c.112.1.1
TM-score=0.648 to 1dowA
SCOP code=a.24.9.1
TM-score=0.596 to 1h2sB
SCOP code=f.17.4.1
TM-score=0.562 to 2ojeD
SCOP code=a.202.1.1
Estimated TM-score of Model 1: 0.5048 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5538 ±0.0778