QUARK Ab Initio Results for YFFQ_ECOLI

Submitted Primary Sequence

>Length 125
MKLLIAIILMVLTGVCFADVGDYRLNGEDNARIESVVTDNCEKTAVLVGGDRLARVEIEYIATLCKPVALVIIYDRFDDIAAIPLKVTLKKVLKENSDEKINLLNKMGDLAGRIVAEQYLGMSFE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKLLIAIILMVLTGVCFADVGDYRLNGEDNARIESVVTDNCEKTAVLVGGDRLARVEIEYIATLCKPVALVIIYDRFDDIAAIPLKVTLKKVLKENSDEKINLLNKMGDLAGRIVAEQYLGMSFE
CHHHHHHHHHHHHCCEEEECCCEETTTTTTCEEEEEETTTTCEEEEEETTTTEEEEEHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLLIAIILMVLTGVCFADVGDYRLNGEDNARIESVVTDNCEKTAVLVGGDRLARVEIEYIATLCKPVALVIIYDRFDDIAAIPLKVTLKKVLKENSDEKINLLNKMGDLAGRIVAEQYLGMSFE
43100000000010000010010202133201010001320220000011110020102000100300000000011210100001000230033223310200130010002000121122234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.475 to 1aisB SCOP code=a.74.1.2	TM-score=0.464 to 1p8cC SCOP code=a.152.1.2	TM-score=0.492 to 1ldjA SCOP code=a.4.5.34	TM-score=0.490 to 2hszA SCOP code=c.108.1.6	TM-score=0.438 to 1tuaA SCOP code=d.51.1.1

Estimated TM-score of Model 1: 0.3492 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3874 ±0.0778