QUARK Ab Initio Results for YFIM_ECOLI


  Submitted Primary Sequence

>Length 107
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH
CHHHHHHHHHHHHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHHCCCCCCTTTTHHHHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAMLSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGASTGYTVWQLTRH
43310000000000011113121113110100000000000021003221224220000000000001002201222140200001000000000000100111235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.541 to 1c17M
SCOP code=f.18.1.1
TM-score=0.666 to 2hujA
SCOP code=a.24.26.1
TM-score=0.542 to 2aplA
SCOP code=a.258.1.1
TM-score=0.564 to 1r5qA
SCOP code=a.186.1.1
TM-score=0.615 to 1n5uA
SCOP code=a.126.1.1
Estimated TM-score of Model 1: 0.5074 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.5565 ±0.0778