QUARK Ab Initio Results for YFJS_ECOLI

Submitted Primary Sequence

>Length 147
MKRKTLPLLALVATSLFLSACDDRSDDLKAISKFKDLTPPRFSDVVSRQDDVSEEWSQVGFSSGLTLQVLRTRESPDGCEGGSYYYLVDMEEKTVQPLMNALCIADNIKLEYHEVTDPYTKEKYFEYSHDGKLMGRLLIPSNPDNRE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKRKTLPLLALVATSLFLSACDDRSDDLKAISKFKDLTPPRFSDVVSRQDDVSEEWSQVGFSSGLTLQVLRTRESPDGCEGGSYYYLVDMEEKTVQPLMNALCIADNIKLEYHEVTDPYTKEKYFEYSHDGKLMGRLLIPSNPDNRE
CCCHHHHHHHHHHHHHHHHHCTTTTTTTHHHHHTTTTTTTCHHHTTTTTTHHHHHHHHCCTTTTTTEEEEETTTTCCCTTTTTTTEEEECHHHHHHHHHHHHHHCCCCEEEEEETTTTTTTCEEEEETTTTTTTTEEECCCTTTTCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRKTLPLLALVATSLFLSACDDRSDDLKAISKFKDLTPPRFSDVVSRQDDVSEEWSQVGFSSGLTLQVLRTRESPDGCEGGSYYYLVDMEEKTVQPLMNALCIADNIKLEYHEVTDPYTKEKYFEYSHDGKLMGRLLIPSNPDNRE
554321211100000000210234233130013023121230231022323012201321222011020021231232032120000010122201100100000320201012122322422001112203210201023333498
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.431 to 2b78A SCOP code=b.122.1.9	TM-score=0.429 to 1dmlE SCOP code=d.131.1.2	TM-score=0.426 to 1nvpB SCOP code=a.32.1.1	TM-score=0.466 to 1a41A SCOP code=d.163.1.2	TM-score=0.430 to 1nvpB SCOP code=a.32.1.1

Estimated TM-score of Model 1: 0.3105 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3459 ±0.0778