QUARK Ab Initio Results for YGBE_ECOLI


  Submitted Primary Sequence

>Length 107
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
TTTTTTTETTTTTTTTTTTTTTEECCHHHHHHHHHHHHHHHHHHTTTTTTEEEEEHHHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEEEHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPMLIYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALFMWLLG
55433201021332123333111101000000000000000100010000000000000000000000000000001012120100000000000000000001115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.479 to 1qdmA
SCOP code=a.64.1.2
TM-score=0.596 to 2okuA
SCOP code=a.48.5.1
TM-score=0.585 to 1aa7A
SCOP code=a.95.1.1
TM-score=0.551 to 1ldjA
SCOP code=a.4.5.34
TM-score=0.478 to 1ya0B
SCOP code=a.118.8.1
Estimated TM-score of Model 1: 0.3430 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3806 ±0.0778