QUARK Ab Initio Results for YGDD_ECOLI

Submitted Primary Sequence

>Length 131
MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGLEYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVTPVGGVSFLAGWALMLVGAIRLKRKGVSHE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGLEYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVTPVGGVSFLAGWALMLVGAIRLKRKGVSHE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Download Predicted Starting Beta-turn Position
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Predicted Solvent Accessibility

>0-buried to 9-exposed
MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGLEYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVTPVGGVSFLAGWALMLVGAIRLKRKGVSHE
55221001000000000000000001102321122010002100100000000000000012232121010000000000000000000000032321120000000000000000000002233322244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.661 to 1w27A SCOP code=a.127.1.2	TM-score=0.774 to 2rldA SCOP code=a.29.16.1	TM-score=0.579 to 2gtvX SCOP code=a.130.1.3	TM-score=0.528 to 1gpjA SCOP code=a.151.1.1	TM-score=0.586 to 1sj8A SCOP code=a.215.1.1

Estimated TM-score of Model 1: 0.4060 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4481 ±0.0778