QUARK Ab Initio Results for YIAA_ECOLI


  Submitted Primary Sequence

>Length 145
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE
TTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTTTTTCHHHHHH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
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Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYYFAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLSEKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE
5544222213000000000000000000000110012013201000000000000000121122323423122100100100000000000001111211111100000000000000000121122123233432422332225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
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  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.615 to 2gtvX
SCOP code=a.130.1.3
TM-score=0.567 to 1c17M
SCOP code=f.18.1.1
TM-score=0.640 to 1c17M
SCOP code=f.18.1.1
TM-score=0.647 to 1fbvA
SCOP code=a.39.1.7
TM-score=0.564 to 1ge9A
SCOP code=d.67.3.1
Estimated TM-score of Model 1: 0.3965 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4379 ±0.0778