QUARK Ab Initio Results for YIGG_ECOLI


  Submitted Primary Sequence

>Length 126
MLRIFIPTSNGKISRRRYIFSFILINFIFAFLIIFFNDGEAGFLVIVSTIVLHYLVINMNCQRLRDSGFIYIKTYVFGTLAVYIISIITMIAEDFACSGNGSMIFLICYFSTFSMLMLAPTDSSKQ
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MLRIFIPTSNGKISRRRYIFSFILINFIFAFLIIFFNDGEAGFLVIVSTIVLHYLVINMNCQRLRDSGFIYIKTYVFGTLAVYIISIITMIAEDFACSGNGSMIFLICYFSTFSMLMLAPTDSSKQ
CEEEEEETTTTTEEEEEHHHHHHHHHHHHHHHTTTTTTTTCEEEEEEEHHHHHHHTTTTTTHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHCTTTTCCEEEEEEEECCCEEEEECCCCTTTT
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLRIFIPTSNGKISRRRYIFSFILINFIFAFLIIFFNDGEAGFLVIVSTIVLHYLVINMNCQRLRDSGFIYIKTYVFGTLAVYIISIITMIAEDFACSGNGSMIFLICYFSTFSMLMLAPTDSSKQ
301110122412112111011000010000110001231310000000000011000111022035221200100000000000000000002101022201000000000101000002333389
123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.444 to 1qjtA
SCOP code=a.39.1.6
TM-score=0.421 to 1ekuB
SCOP code=a.26.1.3
TM-score=0.465 to 1j7xA
SCOP code=c.14.1.2
TM-score=0.439 to 2aw4I
SCOP code=a.4.7.1
TM-score=0.467 to 1xdzA
SCOP code=c.66.1.20
Estimated TM-score of Model 1: 0.3244 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3608 ±0.0778