QUARK Ab Initio Results for YIIR_ECOLI


  Submitted Primary Sequence

>Length 146
MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDIQTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVGRFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDIQTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVGRFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN
CCHHHHHTTTTTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCTTTTTTTTTHHHHHHHHHHHHHHHHHHHHCTTTTTTTTTTTTTTTTCCEEEECTTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDIQTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVGRFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN
45022101113021122100000000000000000000220010000000000000000000022023323100000000000000103212221111100020000000000001000021232313214312201122334349
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.532 to 2gtvX
SCOP code=a.130.1.3		 TM-score=0.561 to 2hyeC
SCOP code=a.4.5.34		 TM-score=0.559 to 1tqgA
SCOP code=a.24.10.3		 TM-score=0.533 to 3ea5B
SCOP code=a.118.1.1		 TM-score=0.543 to 1n4mA
SCOP code=a.74.1.3
Estimated TM-score of Model 1: 0.3658 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4051 ±0.0778