QUARK Ab Initio Results for YJCB_ECOLI


  Submitted Primary Sequence

>Length 93
MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT
CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEETTTTTEEEEETTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT
433111010100020000001000210102012232200000010000000000000000000100010030011000211231133122234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.581 to 1kd9A
SCOP code=h.1.3.1
TM-score=0.578 to 2c2lA
SCOP code=a.118.8.1
TM-score=0.556 to 1gvnA
SCOP code=a.8.2.1
TM-score=0.576 to 1ldjA
SCOP code=a.4.5.34
TM-score=0.537 to 1w27A
SCOP code=a.127.1.2
Estimated TM-score of Model 1: 0.6132 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.6698 ±0.0778