QUARK Ab Initio Results for YPEC_ECOLI


  Submitted Primary Sequence

>Length 108
MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGRGHGHRH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGRGHGHRH
CHHHHHHHHHHHHHHHHHHCCCCEEETTTTEEEECTTTTTTTTTTTTTTTCHHHHHHHHHHCCTTTTTTTTTTTTTTTTTTTCCCCCTTTTTTTTTTTTTCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYWDGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGRGHGHRH
531110100000000100021220200100201003212201001001030220014003123221131210123012333123312231221332232313232345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.449 to 2onrA
SCOP code=c.94.1.1
TM-score=0.480 to 1umgA
SCOP code=d.280.1.1
TM-score=0.430 to 1ichA
SCOP code=a.77.1.2
TM-score=0.487 to 2dt6A
SCOP code=a.217.1.1
TM-score=0.441 to 2b5aA
SCOP code=a.35.1.3
Estimated TM-score of Model 1: 0.2662 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.2985 ±0.0778