QUARK Ab Initio Results for YPJF_ECOLI

Submitted Primary Sequence

>Length 109
MNTLPATISQAAKPCLSPVAVWQMLLTRLLEQHYGLTLNDTPFSDETVIKEHIDAGITLADAVNFLVEKYELVRIDHRGFSWQQQSPYISVVDILRARRSTGLLKTNVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNTLPATISQAAKPCLSPVAVWQMLLTRLLEQHYGLTLNDTPFSDETVIKEHIDAGITLADAVNFLVEKYELVRIDHRGFSWQQQSPYISVVDILRARRSTGLLKTNVK
CCCCCCCCTTTTTTTTCHHHHHHHHHHHHHHHHHCCCCCCTTTTCHHHHHHHHHHTTTTHHHHHHHHHHHHHHTTTTTTTTTTTTTTTTCHHHHHHHHHHHCCCTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNTLPATISQAAKPCLSPVAVWQMLLTRLLEQHYGLTLNDTPFSDETVIKEHIDAGITLADAVNFLVEKYELVRIDHRGFSWQQQSPYISVVDILRARRSTGLLKTNVK
5542322223223201111100110012001210002022011012200220021101102001100110102302232112333122011110010141111233334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.584 to 2i5uA SCOP code=a.275.1.1	TM-score=0.497 to 1xszA SCOP code=a.118.3.1	TM-score=0.504 to 1kqjA SCOP code=a.96.1.2	TM-score=0.514 to 1v4jA SCOP code=a.128.1.1	TM-score=0.518 to 1urjB SCOP code=e.58.1.1

Estimated TM-score of Model 1: 0.3775 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4176 ±0.0778