QUARK Ab Initio Results for YQAA_ECOLI


  Submitted Primary Sequence

>Length 142
MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLVLTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLCLLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
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  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLVLTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLCLLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH
CCHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISHPWVLVLTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLCLLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH
4431100000000000000001020100000001112210100000000010000000000010011332131123001003300000000000100020000000002020000000000010000000000001002114
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.541 to 1kcgC
SCOP code=d.19.1.1
TM-score=0.484 to 1eiaA
SCOP code=a.28.3.1
TM-score=0.573 to 1yg2A
SCOP code=a.4.5.61
TM-score=0.566 to 1fewA
SCOP code=a.7.4.1
TM-score=0.482 to 1sg7A
SCOP code=a.239.1.1
Estimated TM-score of Model 1: 0.4023 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4441 ±0.0778