QUARK Ab Initio Results for LGT_ECOLI


  Submitted Primary Sequence

>Length 291
MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS
CCHHHCTTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTTCHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHCHHHHHHHTTTTTCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTCCCCCCEEEETTTTTTTHHHHCCCCCHHCTTTTTTTTEECCCCHHHHHHHHHHHHHHHHHHHHHCCCTTTTHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRRANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSFHGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNFPFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYIRKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVIMMVWAYRRSPQQHVS
422110111300000000010101000000000000000000110233222123310110000000000000000000011021002000100211110100000000000000000231322002000000000000000000000000101121222010000011221311111221131111122121001120200100010000000000113223320100000000000010002002212120001102201001000000000000000102332344334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.433 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.428 to 1g3nC
SCOP code=a.74.1.1
TM-score=0.499 to 1n4mA
SCOP code=a.74.1.3
TM-score=0.507 to 1ad6A
SCOP code=a.74.1.3
TM-score=0.444 to 2axtZ
SCOP code=f.17.5.1
Estimated TM-score of Model 1: 0.4178 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4607 ±0.0778