QUARK Ab Initio Results for PTNC_ECOLI


  Submitted Primary Sequence

>Length 266
MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPLAAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPLAAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHHHHHHHHHHHHHHHHHHCTTTTHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCTTTTTTTTCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLGDMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPLAAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVALSVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAAFTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD
33120010000000000000010011020110000000000000203100000000000000002001001011000000000000103322100000000000001001100200000001001200431213000000000000000000000000000001200220021013000200200000000000000010022120000000000000002011000000000000000201233332222223222333233325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.527 to 2hr5A
SCOP code=a.25.1.1
TM-score=0.506 to 2r2vA
SCOP code=h.1.3.1
TM-score=0.516 to 1kd9A
SCOP code=h.1.3.1
TM-score=0.443 to 1m5yD
SCOP code=a.223.1.2
TM-score=0.504 to 1z0jB
SCOP code=a.2.19.1
Estimated TM-score of Model 1: 0.3801 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4204 ±0.0778