QUARK Ab Initio Results for YAGU_ECOLI


  Submitted Primary Sequence

>Length 204
MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGSNR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGSNR
CCCCTTTTTTTCCHHHHHHHHHHHHHHHHHHHHTTTTCCCCCTTTTTTCCCCCHHHHHHHHTTTTTTTTTTTCCHHHHHHHCCTTTTTTTEEETTTTTTTEEEEEHHHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHTTTTTCCCCHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTTTTTTC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNIFEQTPPNRRRYGLAAFIGLIAGVVSAFVKWGAEVPLPPRSPVDMFNAACGPESLIRAAGQIDCSRNFLNPPYIFLRDWLGLTDPNAAVYTFAGHVFNWVGVTHIIFSIVFAVGYCVVAEVFPKIKLWQGLLAGALAQLFVHMISFPLMGLTPPLFDLPWYENVSEIFGHLVWFWSIEIIRRDLRNRITHEPDPEIPLGSNR
542233233332100100000000000000041103110112022322212022321121122131223221111100211001231200000011220100000000000000000000031023021110000000000000000001010011222010220001000000000001000200223033332231222344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.460 to 1w5tB
SCOP code=a.4.5.11		 TM-score=0.514 to 1keyB
SCOP code=a.118.16.1		 TM-score=0.519 to 1c9bA
SCOP code=a.74.1.2		 TM-score=0.460 to 1g1xB
SCOP code=a.16.1.2		 TM-score=0.506 to 2okuA
SCOP code=a.48.5.1
Estimated TM-score of Model 1: 0.3067 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3418 ±0.0778