QUARK Ab Initio Results for YAHE_ECOLI


  Submitted Primary Sequence

>Length 287
MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFDDLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAVNFHLIAWLQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNIASAVASMMGLGIGLTPSADDYLTGLALILFIPGHPAEKYKEEFYLGLQRGKNNTTLLSAITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFDDLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAVNFHLIAWLQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNIASAVASMMGLGIGLTPSADDYLTGLALILFIPGHPAEKYKEEFYLGLQRGKNNTTLLSAITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS
CCEEHHCHHHHHHCCCCEEEEEEECEEEEEETTTTEEEEEECCCTTTTTTTTETTTTHHHHHCTTTTEEETTTTTETTTTTTEEEECCCCCCCCCCCCCTTTTCHHHHHHHHHHHHHHCCCCHHCCTTTTTTTTTTTHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTTTTTTCTTTTTHHHHHHHHHHTTTTTTHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHTTTTTTT
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MWALTADADFLAQRGQGQVEQVFARAVNIALPARQQLLTLLCEEYDNAPNSCRLALTHFDDLFRHGDKVQFDDQGITVGQHLHIEMSRCRRWLSPTLQMTAVNFHLIAWLQWHDIIHQHLGENETLFNYRGDNPFYQALNKELHIKRRAVIQAVNDKQNIASAVASMMGLGIGLTPSADDYLTGLALILFIPGHPAEKYKEEFYLGLQRGKNNTTLLSAITLEAALQQRCRENIHRFIHNIIYDIPGNATQAIEKIKHIGSSSGCDMLYGMADGCALSQTYGGNYVS
43001211310232230100000110000001231100000033132011001011210120033222020123001013201010240231211213111231221011101210232122230012131321123201321213121002212233101100020012021001111100000000010111213301310010024023101200010010012220221012002101232223013002201400100000000000000000121123234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.451 to 1qqeA
SCOP code=a.118.8.1
TM-score=0.436 to 1g5aA
SCOP code=b.71.1.1
TM-score=0.402 to 1g1xB
SCOP code=a.16.1.2
TM-score=0.422 to 2aplA
SCOP code=a.258.1.1
TM-score=0.403 to 2r2vA
SCOP code=h.1.3.1
Estimated TM-score of Model 1: 0.3395 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3769 ±0.0778