QUARK Ab Initio Results for YDFE_ECOLI

Submitted Primary Sequence

>Length 255
MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIVCEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCIPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARANQQYTENSTGKISPVIAAIHREYKQTWKTLDDELA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIVCEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCIPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARANQQYTENSTGKISPVIAAIHREYKQTWKTLDDELA
CCCEEEEEECCCHHHHTTTTTHHEEHHHHTTTTHHHHHHHHHHHHHHCTTTTTTTTTCEETTTTTTTCCTTTTTHHHHHHHHTTTTTTTTEEECCCTTTTTTTTCHHHCCHHHHHHHEETTTTTCCCCHHHHHHHHHHTTTTCTTTTHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHTTTTTTTTHHHHHHHHHHHCTTTTCTTTTTTTTTTTCCHHHHCTTTTCCTTTTTCCCCCTTTTTTTCCHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSKVFICAAIPDELATREEGAVAVATAIEAGDERRARAKFHWQFLEHYPAAQDCAYKFIVCEDKPGIPRPALDSWDAEYMQENRWDEESASFVPVETESDPMNVTFDKLAPEVQNAVMVKFDTCENITVDMVISAQELLQEDMATFDGHIVEALMKMPEVNAMYPELKLHAIGWVKHKCIPGAKWPEIQAEMRIWKKRREGERKETGKYTSVVDLARARANQQYTENSTGKISPVIAAIHREYKQTWKTLDDELA
543101000213320043201000000020223310202000200330122320022010032331112121311111002213223311100112243132201032011200100002011132211100100221133322111010020014023021111211120010022303322312302110220243232323321322222321223122322332223222211113231431132012314
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250

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Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.405 to 2nojB SCOP code=a.7.17.1	TM-score=0.443 to 2f66B SCOP code=a.2.17.2	TM-score=0.396 to 3dbyT SCOP code=a.29.13.1	TM-score=0.416 to 1q8cA SCOP code=a.79.1.2	TM-score=0.424 to 1gh0I SCOP code=a.1.1.3

Estimated TM-score of Model 1: 0.2927 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3269 ±0.0778