QUARK Ab Initio Results for YFJJ_ECOLI


  Submitted Primary Sequence

>Length 208
MTYDSEFGSHVSLYRDRIKQVIDDSLNEHLNSMILRVDLHDPIDTENMDNPFFQPRVDSGAISRFTSALKAKLKHDKHIKTQRKDWPDSRHSTLRYAWVREYTKNRKRHYHLILCFNQDAYYHLGDYDLNRNTLRTMITTAWYSALGIPIDSSGKLVNYPPNGKYLLNRKRDNFEQTYSDLMNRVDYMTKVRTKIVGDGDRNFGCSRG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTYDSEFGSHVSLYRDRIKQVIDDSLNEHLNSMILRVDLHDPIDTENMDNPFFQPRVDSGAISRFTSALKAKLKHDKHIKTQRKDWPDSRHSTLRYAWVREYTKNRKRHYHLILCFNQDAYYHLGDYDLNRNTLRTMITTAWYSALGIPIDSSGKLVNYPPNGKYLLNRKRDNFEQTYSDLMNRVDYMTKVRTKIVGDGDRNFGCSRG
CTTTTTTTTTTHHHHHHHHHHHHHHHHHTTTTEEEEEEEETTTTCCCCCCCCTTTTTTTTHHHHHHHHHHHHHHHHHHHHHHCTTTTTTTTTTEEEEEEEEECCTTTTCEEEEEETTTTTETTTTEECCCHHHHHHHHHHHHHHHHCCTTTTTTCEEEECCCCEEEEEETTTTTHHHHHHHHHHHHHHHHHHHTTTTTTTTTTCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTYDSEFGSHVSLYRDRIKQVIDDSLNEHLNSMILRVDLHDPIDTENMDNPFFQPRVDSGAISRFTSALKAKLKHDKHIKTQRKDWPDSRHSTLRYAWVREYTKNRKRHYHLILCFNQDAYYHLGDYDLNRNTLRTMITTAWYSALGIPIDSSGKLVNYPPNGKYLLNRKRDNFEQTYSDLMNRVDYMTKVRTKIVGDGDRNFGCSRG
2212232220022002101200120033021000000001012123222111022412210012002101310331222323433233133020100002112424441000000013100111010222332002000200020021213211100100310100001243213200110020011002212311232231210144
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.427 to 1mnmA
SCOP code=d.88.1.1		 TM-score=0.384 to 2b30A
SCOP code=c.108.1.10		 TM-score=0.405 to 1ungD
SCOP code=a.74.1.1		 TM-score=0.444 to 2gw6A
SCOP code=c.52.2.1		 TM-score=0.421 to 1g2nA
SCOP code=a.123.1.1
Estimated TM-score of Model 1: 0.3306 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3674 ±0.0778