QUARK Ab Initio Results for YHCE_ECOLI


  Submitted Primary Sequence

>Length 181
MKRIITGCLLLNFAMAAQAECNISSSIQNIDYGKRSAAMRQVDRGKTTQLADRTITLVMQCDQDAHIRVQLNTANISNNGFGFGPNGSLNLIASDAFSGSNNLDLALASGKNDNPGSTGTASISTSPNNWLVFMQNGQEVVIDSGKSVSLTLTMAPAFKDEGELTDMTDITGNLTVLVEAK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MKRIITGCLLLNFAMAAQAECNISSSIQNIDYGKRSAAMRQVDRGKTTQLADRTITLVMQCDQDAHIRVQLNTANISNNGFGFGPNGSLNLIASDAFSGSNNLDLALASGKNDNPGSTGTASISTSPNNWLVFMQNGQEVVIDSGKSVSLTLTMAPAFKDEGELTDMTDITGNLTVLVEAK
CCCEEHHHHHHHHHHHHHHHCCCCHHHHTTTTTTHHHHHHHHHTTTTEETTTTEEEEEEEETTTTEEEEEETTTTTTTTTTTECCCTTTTEEEETTTTTTTTHHHHHHCTTTTTTTTCCEEEEECTTTTEEEEEECCCEEEETTTTTEEEEEEECCCTTTTCCEEETTTTTTTTEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRIITGCLLLNFAMAAQAECNISSSIQNIDYGKRSAAMRQVDRGKTTQLADRTITLVMQCDQDAHIRVQLNTANISNNGFGFGPNGSLNLIASDAFSGSNNLDLALASGKNDNPGSTGTASISTSPNNWLVFMQNGQEVVIDSGKSVSLTLTMAPAFKDEGELTDMTDITGNLTVLVEAK
4421010010010000021202022112213212310012313324122014110000010233120101011120211111101301000000111212210100001133313222010001312210000022121000222320100010022143312011123021201001225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180
Download Predicted Solvent Accessibility

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.434 to 1o8vA
SCOP code=b.60.1.2
TM-score=0.406 to 1lq7A
SCOP code=k.9.1.1
TM-score=0.453 to 1dk4A
SCOP code=e.7.1.1
TM-score=0.384 to 1kmmC
SCOP code=c.51.1.1
TM-score=0.408 to 3cr3A
SCOP code=a.208.1.1
Estimated TM-score of Model 1: 0.2894 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3234 ±0.0778