QUARK Ab Initio Results for YHHI_ECOLI

Submitted Primary Sequence

>Length 378
MELKKLMEHISIIPDYRQTWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGTQGRLNKAFEEKFPLKELNNPEHDSYAISEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MELKKLMEHISIIPDYRQTWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGTQGRLNKAFEEKFPLKELNNPEHDSYAISEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS
CCHHHHHHHHHCCCCTTTTTTCEECHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTTTTTCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHTTTTTTTTEETTTTTTTTTCTTTTTTCTTTTEEEETTTTTCEEEEEETTTTTTHHHHHHHHHHCCTTTTTEETTTTTEEECHHHHHHHHCCCCEEEETTTTTTHHHHHHHHHHCHHHCCCCCCCCEETTTTTTTTEEEEEEEEECCCHHCCTTTTTTTTCEEEEEEEEEEEEEETTTTCEEEEEEEEEETTTTTTHHHHHHHHHHHHHHHCCTTTTTTEETTTTCCCCCHHHHHHHHHHHHHHHHHHHHTTTTCCCHHHHHHHHCCCHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MELKKLMEHISIIPDYRQTWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHLDFLKQYGDFENGIPVHDTIARVVSCISPAKFHECFINWMRDCHSSDDKDVIAIDGKTLRHSYDKSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAIPELLNMLDIKGKIITTDAMGCQKDIAEKIQKQGGDYLFAVKGTQGRLNKAFEEKFPLKELNNPEHDSYAISEKSHGREEIRLHIVCDVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPEMTVRYYISSADLTAEKFATAIRNHWHVENKLHWRLDVVMNEDDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDRNYLASVLAGSGLS
441330121022031233223120200100000000000203103102100200120012102133101112000200120122102200110022022133320000103103211332444220000000012210000002033421101000200220213120000100001230022013220100000222113003001210123313323331112233341121000000021133113111323112200000001011134443221101000011322032002001200002241212110001222031231101200000020001002223224221211022011133000100321224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.361 to 2nr4A SCOP code=b.45.1.4	TM-score=0.377 to 1dxjA SCOP code=d.2.1.1	TM-score=0.400 to 1vb5B SCOP code=c.124.1.5	TM-score=0.379 to 1dceA SCOP code=a.118.6.1	TM-score=0.391 to 1ixsB SCOP code=a.4.5.11

Estimated TM-score of Model 1: 0.4008 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.4425 ±0.0778