QUARK Ab Initio Results for YJCZ_ECOLI

Submitted Primary Sequence

>Length 292
MTKTLLDGPGRVLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLSRVQLQTWTNGGMLNAPLSLRLTLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAFGDACRLGSPQAVALLLGDLLEKATQHLAESINAAPTTRHYYHQWFASSTVPTGGEHADFLSWLGKWTTADKQPVCWSVTQRWQTVALGMPRLCSAQRLAGAMLEEIFSVNLA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MTKTLLDGPGRVLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLSRVQLQTWTNGGMLNAPLSLRLTLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAFGDACRLGSPQAVALLLGDLLEKATQHLAESINAAPTTRHYYHQWFASSTVPTGGEHADFLSWLGKWTTADKQPVCWSVTQRWQTVALGMPRLCSAQRLAGAMLEEIFSVNLA
CCCCCCCTTTTEETTTTCHHHETTTTTTTTTTTTTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTTTTTCHHHHHHHHHHHHCHHHHHHHCTTTTHHHHHHHHHHHHHHHHHHHHCCCCTTTTCCHHHHTTTTCTTTTTTHHHHHHHHHHHCTTTTTCEEEEECCCHHHCTTTTCCCCCHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTKTLLDGPGRVLESVYPRFLVDLAQGDDARLPQAHQQQFRERLMQELLSRVQLQTWTNGGMLNAPLSLRLTLVEKLASMLDPGHLALTQIAQHLALLQKMDHRQHSAFPELPQQIAALYEWFSARCRWKEKALTQRGLLVQAGDQSEQIFTRWRAGAYNAWSLPGRCFIVLEELRWGAFGDACRLGSPQAVALLLGDLLEKATQHLAESINAAPTTRHYYHQWFASSTVPTGGEHADFLSWLGKWTTADKQPVCWSVTQRWQTVALGMPRLCSAQRLAGAMLEEIFSVNLA
5542223131200210123100000302223223242231222012301221221111101101110111020022002202211000110121012113122312111231121012003101210311231022211112012102200210311112111110100000100000000100211233001101110022002100331302112210112001212232212011000000410223311000001222320212112101022001100221122324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.491 to 1tdpA SCOP code=a.29.8.1	TM-score=0.424 to 1nlxN SCOP code=a.24.17.1	TM-score=0.450 to 2pp4A SCOP code=a.277.1.1	TM-score=0.458 to 2oo2A SCOP code=a.8.11.1	TM-score=0.435 to 2r2vA SCOP code=h.1.3.1

Estimated TM-score of Model 1: 0.3429 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3806 ±0.0778