QUARK Ab Initio Results for YJFK_ECOLI

Submitted Primary Sequence

>Length 219
MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAKAMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet;T-beta turn
MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAKAMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG
HHHHHHHHHTTTTTTTCCCCCCEETTTTTEEECHHHHHHTTTTEEEETTTTCEEEEEEEEETTTTTTEEEEEETTTTTEEEEETTTTCCTTTTCEEEEEEEEETTTTTTHHHHHHHHTTTTTCCCTTTTTTTEEEETTTTTTTTTTCCEEEEEEEETTTTCEEEEEEEEEEEEETTTTCCEEEEEEEEEETTTTTTTTTTTEEEEECCCCCCEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted 3-state Secondary Structure Types
Download Predicted Starting Beta-turn Position
Download Distance Profile from Fragments

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDELLIALPGEEFTVAAVSHIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYEESYGISKESHWREAINAKAMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNHAKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHIIG
511112311233343212401100001000100100021033201020223301000002011221020000012231000000322432431210200000102111322102200313111022131332101110323333313102011202234423120100000011303442210000101222332331210010000020320102126
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210

Download Predicted Solvent Accessibility

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.402 to 2o62A SCOP code=b.60.1.9	TM-score=0.400 to 1jssA SCOP code=d.129.3.2	TM-score=0.392 to 1l5bA SCOP code=b.89.1.1	TM-score=0.381 to 2iecD SCOP code=d.316.1.1	TM-score=0.409 to 1tf1A SCOP code=d.110.2.2

Estimated TM-score of Model 1: 0.2971 ±0.0833
Estimated TM-score of the Best of Top 5 Model: 0.3315 ±0.0778