Template-based Modeling Results for CCMD_ECOLI


  Submitted Primary Sequence

>Length 69
MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARLRAAQQQEAA
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--------10--------20--------30--------40--------50--------60
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARLRAAQQQEAA
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARLRAAQQQEAA
541111001200210010000000000000000010011112122103210223233221322433334
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--------10--------20--------30--------40--------50--------60
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTPAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHRAILRGVAQQRAREARLRAAQQQEAA
1MUSTER3cf5V0.1410.9281.028threading_1MKP-----SEMRNLQATDFAKEDARKKELMELRFQAAAGQLAQPHRVRQLRREVAQLNTVKAELARKGE
2PPA-I1ojhD0.1670.7831.035threading_2---------------NQPIELSLEQQFSIRSFATQVQNSHDQAKDFLVKLYEQVVREATYQELLKHQWG
3PPA-I2x7aA0.1050.8261.002threading_3-----ATCNHTVALA--SLDAEKAQGQKKVEELEGEITTLNHKLQDASAEVERLRRENQVLSVR-----
4MUSTER3jsiA20.1050.8260.945threading_4VAPAQIGFIKFVLI-----PMFETVTKLFPMVEEIMLQPLWESRDRYEELKRIDDAMKELQK-------
5SPARKS1utg_0.1750.9130.984threading_5ICPRFAHVIENLLLGT-----PSSYETSLKEFEDTMKDAGMQMKKVLDSLP-QTTRENIMKLTEKIVKS
6PROSPECT22crbA0.1591.0000.623threading_6GSSGSRRADRLLAAGKYEEAISCHRKATTYLSEAMQRDSHMKQLLLIQERWKRAKREERLKAHSGPSSG
7PPA-I2kesA0.1280.6810.980threading_7----------------------GSVETCMSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKS
8HHPRED-l2raw_B0.2860.2030.720threading_8LPKAEMNWLDYFAL-------------------------------------------------------
9HHPRED-g3grl_A0.1011.0000.504threading_9LSNCPIAVTHFLHNSANVPFLTGQQGLCALLLGISIYFNDYMKEKLKQLIEKRIGKENFLGASQKPQPN
10SP31utg_0.1690.9420.691threading_10ICPRFAHVIENLLLGTPSSYETSLK---EFEPDDTMKDAGMQMKKVLDSLP-QTTRENIMKLTEKIVKS

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.747 to 3cf5V
SCOP code=a.2.2.1
TM-score=0.451 to 1q90R
SCOP code=f.23.12.1
TM-score=0.719 to 1urqA
SCOP code=h.1.15.1
TM-score=0.576 to 1h2sB
SCOP code=f.17.4.1
TM-score=0.672 to 1gpjA
SCOP code=a.151.1.1