Template-based Modeling Results for GLNK_ECOLI


  Submitted Primary Sequence

>Length 112
MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
CCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCCCCEEEECCCEEEECCEEEEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHEEEECCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
4210100012210310130023020300000102101334221101211210131021010100023310220010003002223213010000202100101223233234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
1MUSTER3ncpA0.4291.0004.145threading_1MKKIEAIVRAEKFPEVKAALEERGFYGMTVTDVKGRGQQGGMQIQFRGRTMEVTLLPKVKLEIVVKDDAVEEVIGLIVNSAFTGSPGDGKIFIIPVEDVVRIRTGERGDDSL
2SPARKS2pii_0.6791.0005.189threading_2MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI
3PROSPECT23ncpA0.4291.0002.801threading_3MKKIEAIVRAEKFPEVKAALEERGFYGMTVTDVKGRGQQGGMQIQFRGRTMEVTLLPKVKLEIVVKDDAVEEVIGLIVNSAFTGSPGDGKIFIIPVEDVVRIRTGERGDDSL
4PPA-I3ncpA0.4291.0005.520threading_4MKKIEAIVRAEKFPEVKAALEERGFYGMTVTDVKGRGQQGGMQIQFRGRTMEVTLLPKVKLEIVVKDDAVEEVIGLIVNSAFTGSPGDGKIFIIPVEDVVRIRTGERGDDSL
5HHPRED-l1hwu_A0.6430.8754.123threading_5MKQVTAIIKPFKLDEVRESLAEVGVTGLTVTEVKGFG-------------YVVDFLPKVKIEVVVDDKVVEQAVDAIIKAARTGKIGDGKIFVQEVEQVIRIRTGETGPDA-
6HHPRED-g2eg2_A0.5680.8483.454threading_6MKKIEAIIKPFKLDEVKDALVEIGIGGMTVTEVKGF-----------------DFLPKVKIEVVVRDEDVEKVVETIVKTAQTGRVGDGKIFIIPVEDVIRIRTGERGEQAI
7SP32pii_0.6791.0005.070threading_7MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI
8SAM-T991pilA0.6791.0004.876threading_8MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTELYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRIRTGEEDDAAI
9MUSTER2ns1B0.9911.0003.784threading_9MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAELYRGAEFSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRIRTGEADEAAL
10SPARKS3m05a0.2260.7500.980threading_10TKLVIAIVQDKDANYLSDQFIDQNVR-ATKLSTTGGFLQSGNTTFI-GIE----------------EERVPEVLEIIKKASHTRQVGGATVLVLPVDQFERF----------

  Predicted Tertiary Structure

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TM-score=0.845 to 1qy7A
TM-score=0.851 to native
SCOP code=d.58.5.1
TM-score=0.845 to 1qy7A
TM-score=0.851 to native
SCOP code=d.58.5.1
TM-score=0.977 to 1pilA
TM-score=0.826 to native
SCOP code=d.58.5.1
TM-score=0.845 to 1qy7A
TM-score=0.851 to native
SCOP code=d.58.5.1
TM-score=0.845 to 1qy7A
TM-score=0.851 to native
SCOP code=d.58.5.1

  Experimental Structure

Download 1gnkB
SCOP code=d.58.5.1