Template-based Modeling Results for HHA_ECOLI


  Submitted Primary Sequence

>Length 72
MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCC
123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
554331221200010230322300220033233302331001010001111021213210230122003214
123456789012345678901234567890123456789012345678901234567890123456789012
--------10--------20--------30--------40--------50--------60--------70
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
1MUSTER1jw2A1.0001.0004.033threading_1MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
2SPARKS1jw2a1.0001.0004.186threading_2MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
3PROSPECT21jw2a1.0001.0001.469threading_3MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
4PPA-I1jw2A1.0001.0004.880threading_4MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
5HHPRED-l1jw2_A1.0000.9867.584threading_5MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFI-
6HHPRED-g1jw2_A1.0001.0005.860threading_6MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
7SP31jw2a1.0001.0004.129threading_7MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
8SAM-T991jw2A1.0001.0005.023threading_8MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFYSAADHRLAELTMNKLYDKIPSSVWKFIR
9MUSTER2jqtA0.4000.7642.311threading_9-----MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDQELINMYRAADHRRAELVSGRLF------------
10SPARKS2jqta0.4000.7641.881threading_10-----MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDQELINMYRAADHRRAELSGGRLF------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.989 to 1jw2A
SCOP code=a.23.5.1
TM-score=0.419 to 1iufA
SCOP code=a.4.1.7
TM-score=0.992 to 1jw2A
SCOP code=a.23.5.1
TM-score=0.992 to 1jw2A
SCOP code=a.23.5.1
TM-score=0.989 to 1jw2A
SCOP code=a.23.5.1