Template-based Modeling Results for HIGB_ECOLI

Submitted Primary Sequence

>Length 104
MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAVFPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKGKK
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAVFPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKGKK
CEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCCCEEEEECCCCEEEEEEEEEECCCEEEEEEEECHHHHHHHHHHHHHCCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAVFPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKGKK
21100031022003301312210210021004120320310131022032131231000010211100000000031110001000003001100311333344
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MHLITQKALKDAAEKYPQHKTELVALGNTIAKGYFKKPESLKAVFPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKGKK
1	MUSTER	1wmiA	0.107	0.808	1.174	threading_1	MRVKIHKQVVKALQSLPAHYRRFLEFRDILEYEPVPREK------FDVIKLEGTGDLDLYRARLGDYRVIYSVNWKDKVIKILKLK--------------PRGR
2	PPA-I	1wmiA	0.094	0.817	1.813	threading_2	YRVKIHKQVVKALQSLPAHYRRFLEFRDILEYEPVPR------EKFDVIKLEGTGDLDLYRARLGDYRVIYSVNWKDKVIKILKLKPRGRA-------------
3	MUSTER	2kheA	0.140	0.827	1.137	threading_3	MRIEFDPRAEKELEKLDEVARRILRFLRERVAT-LEDPRSLGEPLRG----PELGRFWKYRVGD--YRLICHIQDREATVLVLRVG-H----------ARDVYR
4	PPA-I	2kheA	0.126	0.837	1.668	threading_4	YRIEFDPRAEKELEKLDREVARRILRFLRERVATLEDPRSLGEPLRG----PELGRFWKYRVGD--YRLICHIQDREATVLVLRVG-----------HARDVYR
5	MUSTER	2kc9A	0.165	0.875	1.011	threading_5	MFLDFDERALKEWRKLG--STVREQLKKKLVEVL-ESP------RIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVG-KAE-A--SEVYSEAVKR
6	PPA-I	2otrA	0.155	0.808	1.445	threading_6	MLTIEDKDLKILVKNGFDLKLLYKVVGNLATEQPLAP------KYKDHPLKGGLKDFRECHLKPD-LLLVYQIKKQENTLFLVRLGSHSEF-------------
7	PPA-I	2kc9A	0.124	0.856	1.348	threading_7	FLDFDERALKEWRKLGSTVREQLKKKLVEVLESP----------RIEANKLRGMPDCYKIKLRSSGYRLVYQVIDEKVVVFVISVGASEVYSEAVKRIL-----
8	PPA-I	3g5oC	0.138	0.769	1.339	threading_8	TVRFTTTARRDLHKLPPRILAAVVEFAFGDLSREPLR--------VGKPLRRELAGTFSARRGT--YRLLYRIDDEHTTVVILRVDHRAD--------------
9	MUSTER	3bpqD	0.160	0.779	0.979	threading_9	--VLFAKTFVKDLKHVPHIRKRIKLIIEECQNSN--SLNDLK---LDIKKIKGYHNYYRIRVG--NYSIGIEVN---DTIIFRRVL-H----------RKSIYD
10	SPARKS	2khea	0.128	0.827	0.775	threading_10	MRIEFDPRAEKELEKLDEVARRILRFLRE-RVATLEDPRSLGEPLRG----PELGRFWKYRVGD--YRLICHIQDREATVLVLRVGH-----------ARDVYR

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.843 to 1wmiA SCOP code=d.298.1.2	TM-score=0.863 to 1wmiA SCOP code=d.298.1.2	TM-score=0.651 to 1wmiA SCOP code=d.298.1.2	TM-score=0.648 to 1wmiA SCOP code=d.298.1.2	TM-score=0.659 to 1wmiA SCOP code=d.298.1.2