Template-based Modeling Results for KDPF_ECOLI


  Submitted Primary Sequence

>Length 29
MSAGVITGVLLVFLLLGYLVYALINAEAF
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Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAGVITGVLLVFLLLGYLVYALINAEAF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCC
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Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAGVITGVLLVFLLLGYLVYALINAEAF
55201000000000000000000111323
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Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSAGVITGVLLVFLLLGYLVYALINAEAF
1MUSTER2axtm0.2411.0001.706threading_1MEVGLIATALFVLVPSVFLIILYVQTESQ
2SPARKS1ehkc0.2860.9661.838threading_2GALAVILVLTLTILVFWLGVYAVFFARG-
3PPA-I3bz2T0.1850.9311.375threading_3--METITYVFIFACIIALFFFAIFFREPP
4SP31jb0m0.2411.0001.407threading_4MATDTQVYVALVIALLPAVLAFRLSTELY
5MUSTER2l9uA0.2411.0001.608threading_5MALTVIAGLVVIFMMLGGTFLYWRGRRHH
6SPARKS1ehkc10.2860.9661.838threading_6GALAVILVLTLTILVFWLGVYAVFFARG-
7PPA-I2axtm0.2071.0001.345threading_7NQLGLIATALFVLVPSVFLIILYVQTESQ
8SP31jb0x0.2411.0001.376threading_8PTYAFRTFWAVLLLAINFLVAAYYFAAAA
9MUSTER2ki9A0.2690.8971.602threading_9KTLGLVLAVLLIFPVLALMAHSLATT---
10SPARKS1jb0x0.2411.0001.824threading_10PTYAFRTFWAVLLLAINFLVAAYYFAAAA

  Predicted Tertiary Structure

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TM-score=0.542 to 1r7gA
SCOP code=j.35.1.1
TM-score=0.753 to 1kd9A
SCOP code=h.1.3.1
TM-score=0.603 to 1iijA
SCOP code=j.35.1.1
TM-score=0.647 to 1q90R
SCOP code=f.23.12.1
TM-score=0.657 to 1ihqA
SCOP code=k.31.1.1