Template-based Modeling Results for LPP_ECOLI


  Submitted Primary Sequence

>Length 78
MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK
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--------10--------20--------30--------40--------50--------60--------70
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK
CCCEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK
552200110000000000110122221220221033022102301310310211023012101200210120034245
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK
1MUSTER1eq7A1.0000.7182.348threading_1---------------------SSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYR-
2SPARKS1t8za0.7200.6411.554threading_2------------------------AKWDQWSSDWQTWNAKWDQWSNDWNAWRSDWQAWKDDWARWNQRWDNWAT----
3PROSPECT21eq7A0.9820.7180.945threading_3---------------------SSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKY-R
4PPA-I1eq7A1.0000.7183.021threading_4---------------------SSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYR-
5HHPRED-l1jcd_A0.7800.6415.070threading_5-----------------------NAKADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRADNAA-----
6HHPRED-g1jcd_A0.7800.6414.424threading_6-----------------------NAKADQASSDAQTANAKADQASNDANAARSDAQAAKDDAARANQRADNAA-----
7SP31t8za0.7200.6410.976threading_7------------------------AKWDQWSSDWQTWNAKWDQWSNDWNAWRSDWQAWKDDWARWNQRWDNWAT----
8SAM-T991eq7A1.0000.7184.336threading_8---------------------SSNAKIDQLSSDVQTLNAKVDQLSNDVNAMRSDVQAAKDDAARANQRLDNMATKYR-
9MUSTER2kubA0.1710.9740.975threading_9ENLDKMISEAEVLNDMAARKLLDAEQQLELMKSLVATQSQLEATKNLIGATVADLQIAYTTLGNNTQALGNELIKL--
10SPARKS1nyha0.1370.9361.042threading_10-----LSFVDIVLSKAASALDEKEKQLAVANEIIRSLSDEVMRNEIRITSLQGDLTFTKKCLENARSQISEKDAKINK

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.648 to 1kilE
TM-score=0.637 to native
SCOP code=h.1.15.1
TM-score=0.648 to 1kilE
TM-score=0.637 to native
SCOP code=h.1.15.1
TM-score=0.579 to 2fo1D
TM-score=0.514 to native
SCOP code=a.137.14.1
TM-score=0.612 to 3b5nA
TM-score=0.581 to native
SCOP code=h.1.15.1
TM-score=0.648 to 1kilE
TM-score=0.637 to native
SCOP code=h.1.15.1

  Experimental Structure

Download 1eq7A
SCOP code=h.1.16.1