Template-based Modeling Results for NRDR_ECOLI

Submitted Primary Sequence

>Length 149
MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED
CCCCCCCCCCCEEEECCCCCCCCEEEECHHCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED
45012022231200102212322101112302213320212220110102002323232212131011000301242202231022002201220342233302032002001210341231000100100320220320031024135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVAELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGEREVPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED
1	PPA-I	7r1rA1	0.161	0.584	1.036	threading_1	--------------------------------------------MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVS------ISQVELRSHIQFYDGIKTSDIHETIIKAAADLISAIFHLRKKAYGQFEPP------------
2	HHPRED-l	2xap_A	0.149	0.631	1.621	threading_2	-----------------------------------------------NLLVTKRDGSTERINLDKIHRVLDWAAEGLH--NVSISQVELRSHIQ----FYDGIKTSDIHETIIKAAISRDAPDYQYLAALRKKFEP-PALYDHVVKMV-
3	HHPRED-g	3hnc_A	0.106	0.570	1.194	threading_3	-------------------------------------------------------------MFDKITSRIQKLCYGLNVDPAQITMKVIQAETAATLTTKHPDYAILAARIAVSNLHKET---KKVFSDVMEDLYSVLANKDRLNSAII
4	HHPRED-l	3hnc_A	0.145	0.557	1.615	threading_4	-------------------------------------------------------------MFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGL----YSGVTTVELDTLAAETAATTKHPDYAILAAISNLHKETKVFSDVMEDLY-
5	HHPRED-g	2xap_A	0.200	0.638	1.193	threading_5	-----------------------------------------------NLLVTKRDGSTERINLDKIHRVLDWAAEGLNVSISQV-------ELRSHIQFYDGIKTSDIHETIIKAAISRDAPDYQYLAAAYGQFEALYEEFKQMDTFID
6	HHPRED-l	3k8t_A	0.231	0.087	1.614	threading_6	-------------------------------------------------------------------------------------------------------------------------------------TT--KQFSKVVEDLY-
7	HHPRED-g	3k8t_A	0.125	0.161	1.192	threading_7	-----------------------------------------------------------------------------------------------------------------------------QFSKVVEDLYDVYNIKDKLNSAIV
8	HHPRED-l	1qyp_A	0.225	0.268	1.073	threading_8	ITCPKCGNDTAYWMQTRAGDEPSTIF--YKCTKCGHTWRSYE-----------------------------------------------------------------------------------------------------------
9	HHPRED-g	1qyp_A	0.225	0.268	1.087	threading_9	ITCPKCGNDTAYWMQTRAGDEPSTIF--YKCTKCGHTWRSYE-----------------------------------------------------------------------------------------------------------
10	MUSTER	7r1rA1	0.186	0.577	0.785	threading_10	--------------------------------------------MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGHNVS-------ISQVELRSHIQFYDGIKTSDIHETIIKAAADLDAPDYLAIFHLRKQFEPP------------

Predicted Tertiary Structure


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TM-score=0.673 to 7r1rA SCOP code=a.98.1.1	TM-score=0.659 to 7r1rA SCOP code=a.98.1.1	TM-score=0.447 to 7r1rA SCOP code=a.98.1.1	TM-score=0.510 to 7r1rA SCOP code=a.98.1.1	TM-score=0.632 to 7r1rA SCOP code=a.98.1.1