Template-based Modeling Results for NUDB_ECOLI


  Submitted Primary Sequence

>Length 150
MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA
CCCCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCEECCCCEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA
554322332100000000332320000111232310100201013232012000220142022322221000010321132310100113123112101100000012332322122111000010200021021220130022002315
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA
1MUSTER2o1cA1.0000.9803.829threading_1-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
2SPARKS2o1ca1.0000.9803.560threading_2-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
3PROSPECT22o1cA0.9860.9802.418threading_3-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFV--IN
4PPA-I2o1cA1.0000.9803.763threading_4-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
5HHPRED-l2o1c_A1.0000.9802.856threading_5-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
6HHPRED-g2o1c_A1.0000.9802.703threading_6-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
7SP32o1ca1.0000.9803.437threading_7-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVIN--
8SAM-T992o1cA1.0000.9732.961threading_8-KDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVEEGETAPQAAMREVKEEVTIDVVAEQLTLIDCQRTVEFEIFSHLRHRYAPGVTRNTESWFCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVI---
9MUSTER1f3yA0.1990.9732.608threading_9MDSPGYRR--NVGICLMN-NDKKIFAASRLDIPDAWQMPQGGIDEGEDPRNAAIRELREETGVTSAEVIAEVPYWTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDEINLLEFGEWSWVTPEQLIDLTVEFK-KPVYKEVLSVFA
10SPARKS2kdva0.2000.9672.913threading_10IDDDGYRPNVGIVIC---NRQGQVMWARRF-GQHSWQFPQGGINPGESAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINPEFDGWRWVSYWYPVRQVV-SFKRDVYRRVMKEFA

  Predicted Tertiary Structure

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TM-score=0.781 to 1ktgA
TM-score=0.998 to native
SCOP code=d.113.1.1
TM-score=0.340 to 1osnA
TM-score=0.200 to native
SCOP code=c.37.1.1
TM-score=0.781 to 1ktgA
TM-score=0.998 to native
SCOP code=d.113.1.1
TM-score=0.781 to 1ktgA
TM-score=0.998 to native
SCOP code=d.113.1.1
TM-score=0.781 to 1ktgA
TM-score=0.998 to native
SCOP code=d.113.1.1

  Experimental Structure

Download 2o1cA
SCOP code=d.113.1.1