Template-based Modeling Results for PPTA_ECOLI


  Submitted Primary Sequence

>Length 77
MPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
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--------10--------20--------30--------40--------50--------60--------70
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHCCHHCCCHHHCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
21100010022313330122002100200131050332000000220333002311213011213101332222345
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMPHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
1MUSTER1gyxA1.0000.9873.741threading_1-PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
2SPARKS1gyja1.0000.9872.410threading_2-PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
3PROSPECT21gyja1.0000.9871.415threading_3-PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
4PPA-I1gyxA1.0000.9876.054threading_4-PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
5HHPRED-l1gyx_A1.0000.9744.403threading_5-PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMN-
6HHPRED-g1gyx_A1.0000.9873.037threading_6-PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
7SP31gyja1.0000.9872.420threading_7-PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
8SAM-T991gyxA1.0000.9873.310threading_8-PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQAIWDAEIAPQMEALIKKPGYSMNA
9MUSTER2x4kA0.1500.7792.509threading_9MPIVNVKLLEGR-SDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSD----------------
10SPARKS2x4ka0.1550.7532.015threading_10MPIVNVKLLEGR-SDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVVRKSD------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.969 to 1gyxA
TM-score=0.942 to native
SCOP code=d.80.1.1
TM-score=0.969 to 1gyxA
TM-score=0.942 to native
SCOP code=d.80.1.1
TM-score=0.957 to 1gyxA
TM-score=0.988 to native
SCOP code=d.80.1.1
TM-score=0.957 to 1gyxA
TM-score=0.988 to native
SCOP code=d.80.1.1
TM-score=0.969 to 1gyxA
TM-score=0.942 to native
SCOP code=d.80.1.1

  Experimental Structure

Download 1gyjA
SCOP code=d.80.1.1