Template-based Modeling Results for RBFA_ECOLI


  Submitted Primary Sequence

>Length 133
MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED
5543223122003201310020023303233122001001010152111020000012332330032003102300210011003103111001000011211210110130022025333344233443448
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMRMSNLVTSVVKHDEERRVNPDDSKED
1MUSTER1kkgA1.0000.8123.121threading_1MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR-------------------------
2SPARKS1kkga1.0000.8123.824threading_2MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR-------------------------
3PROSPECT22e7gA0.1740.9102.013threading_3RKEDHARLRALNGLLYKALTDLLCTPEVSQELDLNVELSKVSLTPDFSACRAYWKTTLS--AEQNAHMEAVLQRSAAHMRHLLMSQQTLRNVPPIVFVQDKGNAALAELDQLL----------AVADSGPSSG
4PPA-I1kkgA1.0000.8124.715threading_4MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR-------------------------
5HHPRED-l1jos_A0.7100.7526.085threading_5------RSDRVAQEIQKEIAVILQREVKDPRIG-MVTVSDVEVSSDLSYAKIFVTFLFDHDEMAIEQGMKGLEKASPYIRSLLGKAMRLRIVPEIRFIYDQSLVEGM--------------------------
6HHPRED-g1jos_A0.7100.7525.355threading_6------RSDRVAQEIQKEIAVILQREVKDPRIGMV-TVSDVEVSSDLSYAKIFVTFLFDHDEMAIEQGMKGLEKASPYIRSLLGKAMRLRIVPEIRFIYDQSLVEGM--------------------------
7SP31kkga1.0000.8124.119threading_7MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR-------------------------
8SAM-T991kkgA1.0000.8125.682threading_8MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMSRDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNSLVEGMR-------------------------
9MUSTER2kzfA0.3590.7742.822threading_9MNP-AYRKAMLESEIQKLLMEALQQ--RDPRLKKFVTFSRVELSKDKRYADVYVSFLGT--PEERKETVEILNRAKGFFRTFIAKNLRLYVAPEIRFYEDKGIEASVK-------------------------
10SPARKS2kzfa0.3560.7823.768threading_10MNPAY-RKAMLESEIQKLLMEALQ-QLRDPRLKDFVTFSRVELSKDKRYADVYVSFLGT--PEERKETVEILNRAKGFFRTFIAKNLRLYVAPEIRFYEDKGIEASVK-------------------------

  Predicted Tertiary Structure

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TM-score=0.903 to 1kkgA
SCOP code=d.52.7.1
TM-score=0.902 to 1kkgA
SCOP code=d.52.7.1
TM-score=0.902 to 1kkgA
SCOP code=d.52.7.1
TM-score=0.806 to 2e7gA
SCOP code=d.52.7.1
TM-score=0.903 to 1kkgA
SCOP code=d.52.7.1