Template-based Modeling Results for RL13_ECOLI


  Submitted Primary Sequence

>Length 142
MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
CCCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEECCHHHHHHHHEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHCCEEECCCCCCHHHCCCEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
5432213232132100001021310020011003202122213111113201100001011000112320111101111121213322132013221320000001010231210110133010021231312232222125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
1MUSTER2qoxJ1.0001.0004.353threading_1MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
2SPARKS1nkwh0.5430.9865.109threading_2VKTYIPKN--DEQNWVVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKVYTRYTGYQGGLKTETAREALSKHPERVIEHAVFGMLPKGRQGRAMHTRLKVYAGETHPHSAQKPQVLKT
3PROSPECT23pyoJ0.5470.9653.769threading_3-KTYVPK--QVEPRWVLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKIYTRYSGYPGGLKKIPLEKMLATHPERVLEHAVKGMLPKGPLGRRLFKRLKVYAGPDHPHQAQRPEK--L
4PPA-I2hgjM0.5470.9795.112threading_4-KTYVPK--QVEPRWVLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKIYTRYSGYPGGLKKIPLEKMLATHPERVLEHAVKGMLPKGPLGRRLFKRLKVYAGPDHPHQAQRPEKLEV
5HHPRED-l3r8s_J1.0000.9934.701threading_5MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLD-
6HHPRED-g3f1f_N0.5550.9654.094threading_6-KTYVPK--QVEPRWVLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKIYTRYSGYPGGLKKIPLEKMLATHPERVLEHAVKGMLPKGPLGRRLFKRLKVYAGPDHPHQAQRPEKL--
7SP31nkwh0.5430.9865.097threading_7VKTYIPK--NDEQNWVVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKVYTRYTGYQGGLKTETAREALSKHPERVIEHAVFGMLPKGRQGRAMHTRLKVYAGETHPHSAQKPQVLKT
8SAM-T992qoxJ1.0001.0005.688threading_8MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNADKVAVTGNKRTDKVYYHHTGHIGGIKQATFEEMIARRPERVIEIAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI
9MUSTER2hgjM0.5470.9794.123threading_9-KTYVPK--QVEPRWVLIDAEGKTLGRLATKIATLLRGKHRPDWTPNVAMGDFVVVVNADKIRVTGKKLEQKIYTRYSGYPGGLKKIPLEKMLATHPERVLEHAVKGMLPKGPLGRRLFKRLKVYAGPDHPHQAQRPEKLEV
10SPARKS3iz5k0.2380.8873.869threading_10----MVSGSGVCAKRVVVDARHHMLGRLASIVAKELL------------NGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPKTARGEAALARLKAYEGVPPPYDRTKRMVIPD

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.993 to 2qoxJ
TM-score=0.969 to native
SCOP code=c.21.1.1
TM-score=0.365 to 1uiyA
TM-score=0.272 to native
SCOP code=c.14.1.3
TM-score=0.919 to 1pnuH
TM-score=0.820 to native
SCOP code=i.1.1.1
TM-score=0.920 to 2qoxJ
TM-score=0.925 to native
SCOP code=c.21.1.1
TM-score=0.969 to 2hgjM
TM-score=0.862 to native
SCOP code=c.21.1.1

  Experimental Structure

Download 1vt2J
SCOP code=c.21.1.1