Template-based Modeling Results for RL19_ECOLI

Submitted Primary Sequence

>Length 115
MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN
CHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEEEEEEEEEEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCCEEEEEECCCEEHHHHHHHHCCCCHHHEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN
4520132123322433012031000000201024233311200100000022421421010020011200110021102202101022212011010110232202212022225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN
1	MUSTER	3i22P	1.000	0.991	4.142	threading_1	-SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN
2	SPARKS	1nkwn	0.553	0.991	3.830	threading_2	RGELLRGIEQDHTR-QLPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAINGSGSRKSFTVRKISFGEGVERVFPFASPLVNQVTIVERGKVRRAKLYYLRELRGKAARIKSDRS
3	PROSPECT2	3pyoP	0.470	1.000	2.637	threading_3	MGALIKLVESRYVRTDLPEFRPGDTVRVSYKVKEGNRTRIQDFEGIVIRIRRNGFNTTFTVRKVSYGVGVERIFPLHSPLIQKIDIVQRGRARRAKLYFIRNLSDREIRRKLRAD
4	PPA-I	3i22P	1.000	0.991	6.338	threading_4	-SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN
5	HHPRED-l	3r8s_P	1.000	0.983	5.763	threading_5	-SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERL-
6	HHPRED-g	3r8s_P	1.000	0.991	5.218	threading_6	-SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN
7	SP3	1nkwn	0.553	0.991	2.435	threading_7	IGELLRGIEQDHTR-QLPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAINGSGSRKSFTVRKISFGEGVERVFPFASPLVNQVTIVERGKVRRAKLYYLRELRGKAARIKSDRS
8	SAM-T99	3i22P	1.000	0.991	5.637	threading_8	-SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN
9	MUSTER	2awbP	1.000	0.991	3.779	threading_9	-SNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFEGVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRERTGKAARIKERLN
10	SPARKS	1rgs_2	0.128	0.948	0.621	threading_10	KVSILESLDKWERLTEPVQFEDGQKIV-----VQGEPDEFFIILSAAVLQRRSENEEFVEVGRLGPSFG-EIALLMNRPRAATVVARGPLKLDRPRFERLGPCSDILKRNIQQYN

Predicted Tertiary Structure


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TM-score=0.802 to 2awbP TM-score=0.797 to native SCOP code=b.34.5.6	TM-score=0.802 to 2awbP TM-score=0.797 to native SCOP code=b.34.5.6	TM-score=0.738 to 2awbP TM-score=0.733 to native SCOP code=b.34.5.6	TM-score=0.774 to 2awbP TM-score=0.780 to native SCOP code=b.34.5.6	TM-score=0.802 to 2awbP TM-score=0.797 to native SCOP code=b.34.5.6

Experimental Structure

Download 1vs6P

SCOP code=b.34.5.6