Template-based Modeling Results for RL23_ECOLI


  Submitted Primary Sequence

>Length 100
MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE
CCCHHHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE
5431320130021010121012014422100020043022210220023004031220000003132221132213333111000103422201012235
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE
1MUSTER1n88A0.4170.9604.051threading_1MKT---AYDVILAPVLSEKAYAGFAE-GKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEGLI
2SPARKS1nkwr0.4520.9303.442threading_2-----SHYDILQAPVISEKAYSAME-RGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRFIGQRNDRKKAIVRLAEGQSIEALAGQ-
3PROSPECT23pyoT0.4240.9201.994threading_3TAY-----DVILAPVLSEKAYAGFA-EGKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEG--
4PPA-I1n88A0.4170.9606.204threading_4MKT---AYDVILAPVLSEKAYAGFAE-GKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEGLI
5HHPRED-l3r8s_T1.0000.9304.631threading_5MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNL-------
6HHPRED-g3pyt_T0.4240.9203.886threading_6-----TAYDVILAPVLSEKAYAGFAE-GKYTFWVHPKATKTEIKNAVETAFKVKVVKVNTLHVRGKKKRLGRYLGKRPDRKKAIVQVAPGQKIEALEG--
7SP31nkwr0.4520.9303.619threading_7-----SHYDILQAPVISEKAYSAME-RGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRFIGQRNDRKKAIVRLAEGQSIEALAGQ-
8SAM-T993iy9T1.0000.9904.251threading_8MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGA-
9MUSTER3iy9T1.0000.9903.879threading_9MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIKAAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGA-
10SPARKS1s1it0.4340.7602.818threading_10-------YKVIEQPITSETAMKKVEDGNILVFQVSMKANKYQIKKAVKELYEVDVLKVNTLVRPNGTK-------------KAYVRLTADYDLDIA----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.947 to 1n88A
TM-score=0.745 to native
SCOP code=d.12.1.1
TM-score=0.938 to 1n88A
TM-score=0.740 to native
SCOP code=d.12.1.1
TM-score=0.810 to 2aarR
TM-score=0.722 to native
SCOP code=d.12.1.1
TM-score=0.855 to 2aarR
TM-score=0.746 to native
SCOP code=d.12.1.1
TM-score=0.947 to 1n88A
TM-score=0.745 to native
SCOP code=d.12.1.1

  Experimental Structure

Download 1vs6T
SCOP code=d.12.1.1