Template-based Modeling Results for RL27_ECOLI


  Submitted Primary Sequence

>Length 85
MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE
CCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCEEEEECCCEECCCCCEEECCCCCEEEEEEEEEEEEEECCCCCEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE
5533322211422332313210012021110110100011200211201100003330000102010202132344321111213
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE
1MUSTER2hgqZ0.5950.9884.356threading_1MAHKKGLGSTRNGRDSQAKRLGVKRYEGQVVRAGNILVRQRGTRFKPGKNVGMGRDFTLFALVDGVVEFQDRG-RLGRYVHVRPL
2SPARKS1nkwu0.6990.9764.179threading_2-AHKKGVGSSKNGRDSNPKYLGVKKFGGEVVKAGNILVRQRGTKFKAGQGVGMGRDHTLFALSDGKVVFINKG-KGARFISIEAA
3PROSPECT23pyoW0.5600.8821.645threading_3---------TKNGRDSQAKRLGVKRYEGQVVRAGNILVRQRGTRFKPGKNVGMGRDFTLFALVDGVVEFQDRG-RLGRYVHVRPL
4PPA-I2hgqZ0.5950.9886.465threading_4MAHKKGLGSTRNGRDSQAKRLGVKRYEGQVVRAGNILVRQRGTRFKPGKNVGMGRDFTLFALVDGVVEFQDRG-RLGRYVHVRPL
5HHPRED-l2zjr_T0.7070.9655.981threading_5-AHKKGVGSSKNGRDSNPKYLGVKKFGGEVVKAGNILVRQRGTKFKAGQGVGMGRDHTLFALSDGKVVFINKG-KGARFISIEA-
6HHPRED-g2zjr_T0.6990.9765.069threading_6-AHKKGVGSSKNGRDSNPKYLGVKKFGGEVVKAGNILVRQRGTKFKAGQGVGMGRDHTLFALSDGKVVFINKG-KGARFISIEAA
7SP31nkwu0.6990.9762.624threading_7-AHKKGVGSSKNGRDSNPKYLGVKKFGGEVVKAGNILVRQRGTKFKAGQGVGMGRDHTLFALSDGKVVFINKG-KGARFISIEAA
8SAM-T993bbxW1.0000.9884.503threading_8-AHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTKFHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE
9MUSTER2zjrT0.6990.9764.206threading_9-AHKKGVGSSKNGRDSNPKYLGVKKFGGEVVKAGNILVRQRGTKFKAGQGVGMGRDHTLFALSDGKVVFINKG-KGARFISIEAA
10SPARKS2akka0.2120.7760.778threading_10--------MSIEVRDCNGALL----ADGDNVSKGSSTVLKRGTMI---RGIRLTSEDEIEGRTDKIKGLVLRTEFLKKAGS----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.714 to 2zjrT
TM-score=0.368 to native
SCOP code=b.84.4.1
TM-score=0.714 to 2zjrT
TM-score=0.368 to native
SCOP code=b.84.4.1
TM-score=0.866 to 1sm1U
TM-score=0.682 to native
SCOP code=i.1.1.2
TM-score=0.735 to 2qamW
TM-score=0.364 to native
SCOP code=b.84.4.1
TM-score=0.714 to 2zjrT
TM-score=0.368 to native
SCOP code=b.84.4.1

  Experimental Structure

Download 1vs6W
SCOP code=b.84.4.1