Template-based Modeling Results for RL34_ECOLI


  Submitted Primary Sequence

>Length 46
MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
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--------10--------20--------30--------40
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
CCCCCCCCCEEEECCCCHHHHHCCCCHHHHHHHHHHCCCEEEEECC
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--------10--------20--------30--------40
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
5533222221212231111121123311200112233222202226
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--------10--------20--------30--------40
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
1MUSTER3fik21.0001.0004.753threading_1MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
2SPARKS2kzya0.1961.0000.837threading_2MAQETNPGPMLCSTGCGFYGNPRTNGYKEHLQRQQNSGRMSPMGTA
3PROSPECT21nkw20.6961.0000.973threading_3MKRTYQPNNRKRAKTHGFRARMKTKSGRNILARRRAKGRHQLTVSD
4PPA-I3fik21.0001.0006.810threading_4MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
5HHPRED-l2j01_70.6440.9785.661threading_5MKRTWQPNRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTPA-
6HHPRED-g2j01_70.6301.0004.606threading_6MKRTWQPNRRKRAKTHGFRARMRTPGGRKVLKRRRQKGRWRLTPAV
7SP33he5b0.1330.9780.706threading_7ARNAYLRKKIARLKKDNLQLERDEQNLEKIIANLRDEARLENEVA-
8SAM-T993fik21.0001.0003.732threading_8MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
9MUSTER2aw421.0001.0004.521threading_9MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTVSK
10SPARKS1zrja0.1630.9350.805threading_10GSSGSSGMDVRRLKVNELREELQRRGGKAELAERLQA---ALSGPS

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.597 to 2aw42
TM-score=0.590 to native
SCOP code=j.118.1.1
TM-score=0.597 to 2aw42
TM-score=0.590 to native
SCOP code=j.118.1.1
TM-score=0.384 to 1uamA
TM-score=0.291 to native
SCOP code=c.116.1.4
TM-score=0.638 to 2aw42
TM-score=0.651 to native
SCOP code=j.118.1.1
TM-score=0.597 to 2aw42
TM-score=0.590 to native
SCOP code=j.118.1.1

  Experimental Structure

Download 1vs62
SCOP code=j.118.1.1