Template-based Modeling Results for RS8_ECOLI

Submitted Primary Sequence

>Length 130
MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA
CCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEEEECCCCEEEECCEECCCCCCEEEECHHHHHHHHCCCEEEEEECCCCEEEHHHHHHHCCCCEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA
5413000010011021022133110202113211100200332201310212233422010002113221002101212322211112231012012210000000131001021012122201000102
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130

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Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA
1	MUSTER	2qbfH	1.000	0.992	4.415	threading_1	-SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA
2	SPARKS	3rf2a	0.441	0.977	5.034	threading_2	---VDPIADMFSAIKNAIMRRDDFLYVPSSKLKERILDVLKKEGFIQDWEALKGTQYPIKIYLKYLDRKSAITNIVKVSKGGRRVYAGVRTMPYVKRGLGIAIVSTDAGVMTDHEARRMRKGGEVIAFVW
3	PROSPECT2	3pynH	0.496	0.992	3.072	threading_3	M-LTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDDGKPYLRVYLKYGPREQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLTDREARKLGVGGELICEVW
4	PPA-I	2qbfH	1.000	0.992	4.872	threading_4	-SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA
5	HHPRED-l	1s03_H	1.000	0.969	5.257	threading_5	---QDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYV-
6	HHPRED-g	1sei_A	0.488	0.992	4.200	threading_6	-VMTDPIADMLTAIRNANMVRHEKLEVPASKIKREIAEILKREGFIRDYEYIDNKQGILRIFLKYGPNERVITGLKRISKPGLRVYVKAHEVPRVLNGLGIAILSTSQGVLTDKEARQKGTGGEIIAYVI
7	SP3	3rf2a	0.441	0.977	4.977	threading_7	V---DPIADMFSAIKNAIMRRDDFLYVPSSKLKERILDVLKKEGFIQDWEALKGTQYPIKIYLKYLDPKSAITNIVKVSKGGRRVYAGVRTMPYVKRGLGIAIVSTDAGVMTDHEARRMRKGGEVIAFVW
8	SAM-T99	2qbfH	1.000	0.992	4.507	threading_8	-SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA
9	MUSTER	2avyH	1.000	0.992	4.406	threading_9	-SMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA
10	SPARKS	1seia	0.488	0.992	4.913	threading_10	-VMTDPIADMLTAIRNANMVRHEKLEVPASKIKREIAEILKREGFIRDYEYIENKQGILRIFLKYGPNERVITGLKRISKPGLRVYVKAHEVPRVLNGLGIAILSTSQGVLTDKEARQKGTGGEIIAYVI

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.994 to 2qbfH TM-score=0.975 to native SCOP code=i.1.1.1	TM-score=0.992 to 2avyH TM-score=0.995 to native SCOP code=d.140.1.1	TM-score=0.948 to 2qbfH TM-score=0.944 to native SCOP code=i.1.1.1	TM-score=0.949 to 2qbfH TM-score=0.947 to native SCOP code=i.1.1.1	TM-score=0.994 to 2qbfH TM-score=0.975 to native SCOP code=i.1.1.1

Experimental Structure

Download 1vs5H

SCOP code=d.140.1.1