Template-based Modeling Results for RS11_ECOLI


  Submitted Primary Sequence

>Length 129
MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV
CCCCCCCCCCCCEEECCCEEEEEECCCCCEEEEEECCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV
544332424342222132000002012100000001341111000001011121233112100110022002002311021010002111311200020131120200001122301221132344345
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV
1MUSTER1i94K0.5370.9384.360threading_1--------KKKVKRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRK
2SPARKS1fjgk0.5380.9074.484threading_2------------KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRK
3PROSPECT23bbnK0.5340.9152.967threading_3-----------SARKIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCGFRGTKRGTPFAAQTAAGNAIRTVVEQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV
4PPA-I1i94K0.5370.9384.745threading_4--------KKKVKRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRK
5HHPRED-l2vqe_K0.5430.8995.868threading_5------------KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFR-
6HHPRED-g2vqe_K0.5380.9074.901threading_6------------KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRK
7SP31fjgk0.5380.9074.428threading_7------------KRQVASGRAYIHASYNNTIVTITDPDGNPITWSSGGVIGYKGSRKGTPYAAQLAALDAAKKAMAYGMQSVDVIVRGTGAGREQAIRALQASGLQVKSIVDDTPVPHNGCRPKKKFRK
8SAM-T993i1sK1.0000.9076.561threading_8------------RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV
9MUSTER3i1sK1.0000.9074.353threading_9------------RKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNGCRPPKKRRV
10SPARKS1s1hk0.3970.8994.257threading_10------------DNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRESSPYAAMLAAQDVAAKCREVGITAVHVKIRAPGPGGQAALRALARSGLRIGRIEDVTPVPSDSTRKKGGRR-

  Predicted Tertiary Structure

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TM-score=0.918 to 1i94K
TM-score=0.879 to native
SCOP code=c.55.4.1
TM-score=0.918 to 1i94K
TM-score=0.879 to native
SCOP code=c.55.4.1
TM-score=0.851 to 1i94K
TM-score=0.862 to native
SCOP code=c.55.4.1
TM-score=0.910 to 3bbnK
TM-score=0.901 to native
SCOP code=i.1.1.1
TM-score=0.918 to 1i94K
TM-score=0.879 to native
SCOP code=c.55.4.1

  Experimental Structure

Download 1vs5K
SCOP code=i.1.1.1