Template-based Modeling Results for PRTL_ECOLI


  Submitted Primary Sequence

>Length 29
MRSFDQGSTRAPARERCRRQRPEGRSAQR
12345678901234567890123456789
--------10--------20
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRSFDQGSTRAPARERCRRQRPEGRSAQR
CCCCCCCCCCCCHHHHHHHCCCCCCCCCC
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--------10--------20
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRSFDQGSTRAPARERCRRQRPEGRSAQR
54323322240213210333223242244
12345678901234567890123456789
--------10--------20
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRSFDQGSTRAPARERCRRQRPEGRSAQR
1MUSTER1q3zA0.3451.0001.282threading_1VKCFNEGHTRAPRKKGCWKCGKEGHQTER
2SPARKS1myn_0.3101.0001.119threading_2LSGRYKGPCAVWDNETCRRVKEEGRSSGH
3PPA-I1sghB0.3080.8971.142threading_3---LDFNISLAMAKERAHQKRSSKRAPQM
4MUSTER1q3yA0.3101.0001.262threading_4VKCFNEGHTRAPRKKGCWKCGKEGHQMKD
5SPARKS1p6gn0.3330.9311.074threading_5LRKF--GLSRIKVREAAMREIPGLKKASW
6PPA-I1dmcA0.1031.0001.096threading_6CQKCTSGCKCATKEECSKTCTKPCSCCPK
7MUSTER1sghB0.3080.8971.209threading_7---LDFNISLAMAKERAHQKRSSKRAPQM
8SPARKS1dmc_0.1430.9661.018threading_8CQKCTSGC-KCATKEECSKTCTKPCSCCP
9PPA-I1wpdA0.2590.9311.066threading_9--VSCTGSKDCYAPCRKQTGCPYGKCMNR
10MUSTER2a51A0.3570.9661.204threading_10LTCFNCGKPGHTARM-CRQPRQEGSKEHR

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.462 to 1q3zA
SCOP code=g.40.1.1
TM-score=0.453 to 1qloA
SCOP code=j.35.1.1
TM-score=0.694 to 1mynA
SCOP code=g.3.7.4
TM-score=0.421 to 1sghB
SCOP code=j.117.1.1
TM-score=0.457 to 1q3yA
SCOP code=g.40.1.1