Template-based Modeling Results for USPF_ECOLI


  Submitted Primary Sequence

>Length 144
MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHCCCEEEECCCCCCHHHHEECCHHHHHHHCCCCCEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR
512100000111313101200110120043230200000002212211112112213220022022202210220033143332202020120102210020034130000000012130220000010100132130211112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNRTILVPIDISDSELTQRVISHVEEEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILELAKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR
1MUSTER1mjhB0.2900.9582.260threading_1MYKKILYPTDFS--ETAEIALKHVKAFKTLKAEEVILLHVIDEREIKS----VEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGTNLKEILLGSVTENVIKKSNKPVLVVK
2SPARKS3hgma0.2410.9793.131threading_2MFNRIMVPVDGS--KGAVKALEKGVGLQQLTGAELYILCVFKHHSLASLSMARPEQLDIPDDALKDYATEIAVQAKTRATELGVPVRAFVKGGRPSRTIVRFARKRECDLVVIGAQTNGDKSLLLGSVAQRVAGSAHCPVLVV-
3PROSPECT23fg9A0.1790.9722.506threading_3LVYRILLTVDEDDNTSSERAFRYATTLAHDYDVPLGICSVLESEDINI----FDSLTPSKIQAKRKHVEDVVAEYVQLAEQRGVVEPLVYEGGDVDDVILEVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKAPISVIVVR
4PPA-I3hgmA0.2550.9793.225threading_4MFNRIMVPVDGS--KGAVKALEKGVGLQQLTGAELYILCVFKHHSLSMARPEQLDIPDDALKDYATEIAVQAKTRATELGVPADKVRAFVKGGRPSRTIVRFARKRECDLVVIGAQTNGDKSLLLGSVAQRVAGSAHCPVLVV-
5HHPRED-l1mjh_A0.2960.9383.276threading_5MYKKILYPTDFS--ETAEIALKHVKAFKTLKAEEVILLHVIDEREIK------EEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGTNLKEILLGSVTENVIKKSNKPVLVV-
6HHPRED-g1mjh_A0.2850.9512.725threading_6MYKKILYPTDFSET--AEIALKHVKAFKTLKAEEVILLHVIDEREIK-----VEEFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHGKNLKEILLGSVTENVIKKSNKPVLVVK
7SP33s3ta0.2360.9723.374threading_7RYTNILVPVDSS--DAAQAAFTEAVNIAQRHQANLTALYVVDDSAYHTPALDPV--LSELLDAEAAHAKDARQRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQPEIDLIVLGATTNSPHRVAVGSTTSYVVDHAPCNVIVIR
8SAM-T992z3vA0.2720.9442.999threading_8MFKTILLAYDGSEHA--RRAAEVAKAEAEAHGARLIVVHAYEPVPDYLGEP----FFEEALRRRLERAEGVLEEARALTGVPKE--DALLLEGVPAEAILQAARAEKADLIVMGTRGLGALGLFLGSQSQRVVAEAPCPVLLVR
9MUSTER2z3vA0.2790.9442.223threading_9MFKTILLAYDGS--EHARRAAEVAKAEAEAHGARLIVVHAYEPVPDYLG----EPFFEEALRRRLERAEGVLEEARALTGVPKE--DALLLEGVPAEAILQAARAEKADLIVMGTRLGALGSLFLGSQSQRVVAEAPCPVLLVR
10SPARKS3s3ta0.2360.9723.033threading_10RYTNILVPVDSS--DAAQAAFTEAVNIAQRHQANLTALYVVDDSAYHTPALDPV--LSELLDAEAAHAKDARQRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQHEIDLIVLGATTNSPHRVAVGSTTSYVVDHAPCNVIVIR

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.944 to 1mjhB
SCOP code=c.26.2.4
TM-score=0.926 to 1mjhB
SCOP code=c.26.2.4
TM-score=0.819 to 2z3vA
SCOP code=c.26.2.4
TM-score=0.790 to 2z3vA
SCOP code=c.26.2.4
TM-score=0.808 to 2z3vA
SCOP code=c.26.2.4