Template-based Modeling Results for YAFQ_ECOLI


  Submitted Primary Sequence

>Length 92
MIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG
CCCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCEEEEEECCCEEEEEEECCCEEEEEECCCHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG
54212011133013003103443330310120010003322302221221303121300110002100000020233100001011122115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLRFERTGTHAALFG
1MUSTER1z8mA0.3070.9574.513threading_1M--LKLNLKKSFQKDFDKLLLNGFDDSVLNEVILTLRKKE-PLDPQFQDHALKGKWKPFRECHIKPDVLLVYLVKDDELILLRLGSHSELF-
2SPARKS1z8ma0.2950.9573.934threading_2--MLKLNLKKSFQKDFDKLLLNGFDDSVLNEVILTLRKK-EPLDPQFQDHALKGKWKPFRECHIKPDVLLVYLVKDDELILLRLGSHSELF-
3PROSPECT22otrA0.3750.9571.685threading_3M--LTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQ-PLAPKYKDHPLKGGLKDFRECHLKPDLLLVYQIQENTLFLVRLGSHSELF-
4PPA-I1z8mA0.2950.9578.914threading_4--MLKLNLKKSFQKDFDKLLLNGFDDSVLNEVILTLRKK-EPLDPQFQDHALKGKWKPFRECHIKPDVLLVYLVKDDELILLRLGSHSELF-
5HHPRED-l1z8m_A0.2950.9576.737threading_5--MLKLNLKKSFQKDFDKLLLNGFDDSVLNEVILTLRK-KEPLDPQFQDHALKGKWKPFRECHIKPDVLLVYLVKDDELILLRLGSHSELF-
6HHPRED-g1z8m_A0.2950.9575.834threading_6--MLKLNLKKSFQKDFDKLLLNGFDDSVLNEVILTLRKK-EPLDPQFQDHALKGKWKPFRECHIKPDVLLVYLVKDDELILLRLGSHSELF-
7SP31z8ma0.3070.9573.890threading_7M--LKLNLKKSFQKDFDKLLLNGFDDSVLNEVILTLRKKE-PLDPQFQDHALKGKWKPFRECHIKPDVLLVYLVKDDELILLRLGSHSELF-
8SAM-T992otrA0.3520.9574.833threading_8--MLTIETSKKFDKDLKILVKNGFDLKLLYK-VVGNLATEQPLAPKYKDHPLKGGLKDFRECHLKPDLLLVYQIKKQTLFLVRLGSHSELF-
9MUSTER2otrA0.3750.9574.368threading_9M--LTIETSKKFDKDLKILVKNGFDLKLLYKVVGNLATEQ-PLAPKYKDHPLKGGLKDFRECHLKPDLLLVYQIKENTLFLVRLGSHSELF-
10SPARKS3oeic0.1550.9131.719threading_10V--RSVNFDPDAWEDFLFWLAADRKARRITRLIGEIQRDPFSGIGKP--EPLQGELSGYWSRRIDDEHRLVYRAGDDEVTMLKARYHY----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.953 to 1z8mA
SCOP code=d.298.1.2
TM-score=0.951 to 1z8mA
SCOP code=d.298.1.2
TM-score=0.962 to 1z8mA
SCOP code=d.298.1.2
TM-score=0.659 to 1z8mA
SCOP code=d.298.1.2
TM-score=0.957 to 1z8mA
SCOP code=d.298.1.2