Template-based Modeling Results for YBDZ_ECOLI


  Submitted Primary Sequence

>Length 72
MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCVLPAGWDIVCQPQSQASCQQWLEAHWRTLTPTNFTQLQEAQ
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--------10--------20--------30--------40--------50--------60--------70
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCVLPAGWDIVCQPQSQASCQQWLEAHWRTLTPTNFTQLQEAQ
CCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCVLPAGWDIVCQPQSQASCQQWLEAHWRTLTPTNFTQLQEAQ
542212233330000001023210000122020021022213231120012002201211101301212344
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--------10--------20--------30--------40--------50--------60--------70
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAFSNPFDDPQGAFYILRNAQGQFSLWPQQCVLPAGWDIVCQPQSQASCQQWLEAHWRTLTPTNFTQLQEAQ
1MUSTER2khrA0.3940.9864.986threading_1M-STNPFDDDNGAFFVLVNDEDQHSLWPVFADIPAGWRVVHGEASRAACLDYVEKNWTDLRPKSLRDAMVED
2SPARKS2gpfa0.2290.9724.083threading_2--MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRPLSLRQHMDKA
3PROSPECT22khrA0.3751.0001.594threading_3GSSTNPFDDDNGAFFVLVNDEDQHSLWPVFADIPAGWRVVHGEASRAACLDYVEKNWTDLRPKSLRDAMVED
4PPA-I2khrA0.3751.0009.574threading_4HMSTNPFDDDNGAFFVLVNDEDQHSLWPVFADIPAGWRVVHGEASRAACLDYVEKNWTDLRPKSLRDAMVED
5HHPRED-l2pst_X0.2300.8477.630threading_5---------DDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRPLSLRQHMD--
6HHPRED-g2pst_X0.2300.8476.064threading_6---------DDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRPLSLRQHMD--
7SP32gpfa0.2290.9723.853threading_7--MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRPLSLRQHMDKA
8SAM-T992khrA0.3751.0005.237threading_8HMSTNPFDDDNGAFFVLVNDEDQHSLWPVFADIPAGWRVVHGEASRAACLDYVEKNWTDLRPKSLRDAMVED
9MUSTER2gpfA0.2290.9724.968threading_9--MTSVFDRDDIQFQVVVNHEEQYSIWPEYKEIPQGWRAAGKSGLKKDCLAYIEEVWTDMRPLSLRQHMDKA
10SPARKS2khra0.3940.9863.983threading_10M-STNPFDDDNGAFFVLVNDEDQHSLWPVFADIPAGWRVVHGEASRAACLDYVEKNWTDLRPKSLRDAMVED

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.492 to 2gpfA
SCOP code=d.100.2.1
TM-score=0.485 to 2gpfA
SCOP code=d.100.2.1
TM-score=0.816 to 2gpfA
SCOP code=d.100.2.1
TM-score=0.492 to 2gpfA
SCOP code=d.100.2.1
TM-score=0.485 to 2gpfA
SCOP code=d.100.2.1