Template-based Modeling Results for YBII_ECOLI


  Submitted Primary Sequence

>Length 88
MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHCCCCEEHHHHHHHHHHHHHHHCCCCCCCCCHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
5431212231012102210220012012313413023003303230131123202101001102212221332131222421332225
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--------10--------20--------30--------40--------50--------60--------70--------80
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
1MUSTER2kgoA1.0001.0004.613threading_1MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
2SPARKS2kgoa1.0001.0004.722threading_2MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
3PROSPECT22kgoA1.0001.0001.743threading_3MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
4PPA-I2kgoA1.0001.0008.256threading_4MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
5HHPRED-l2kgo_A1.0000.9896.769threading_5MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQL-
6HHPRED-g2kgo_A1.0001.0006.525threading_6MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
7SP32kgoa1.0001.0004.539threading_7MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
8SAM-T992kgoA1.0001.0004.285threading_8MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR
9MUSTER2kq9A0.2880.7501.293threading_9RASERSNDEVLLGQVGQDELRAIDAALARIASG-TFGTCVKCGKRISEDRLKAVPYTPFCQECAAAL---------------------
10SPARKS1tjla0.2220.8182.438threading_10EEFSL---ELRNRDRERKLIKKIEKTLKKVEDE-DFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.382 to 1x64A
SCOP code=g.39.1.3
TM-score=0.374 to 2g80A
SCOP code=c.108.1.22
TM-score=0.382 to 1x64A
SCOP code=g.39.1.3
TM-score=0.382 to 1x64A
SCOP code=g.39.1.3
TM-score=0.382 to 1x64A
SCOP code=g.39.1.3