Template-based Modeling Results for YBJQ_ECOLI


  Submitted Primary Sequence

>Length 107
MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR
CEEECCCCCCCEEEEEEEEEEEEEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHCCCCCEEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR
20010132131110010000000100000211310010011012130210131033012200320021032120200000000031013310000000000002144
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTAVKTRR
1MUSTER1y2iA0.9810.9723.008threading_1-QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGS--LVSVSGTAVKTRR
2SPARKS1y2ia0.9810.9724.995threading_2-QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGS--LVSVSGTAVKTRR
3PROSPECT21vr4A0.5440.9631.847threading_3MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVRD--GMLMVAVSGTAVRI--
4PPA-I1vr4A0.5440.9636.337threading_4MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVR--DGMLMVAVSGTAVRI--
5HHPRED-l1y2i_A0.9900.9537.214threading_5-QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGS---VSVSGTAVKTR-
6HHPRED-g1y2i_A0.9900.9636.718threading_6-QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGS---VSVSGTAVKTRR
7SP31y2ia0.9620.9725.262threading_7-QFSTTPTLEGLTIVEYCGVVTGEAILGANIFRDFFAGIRDIVGGRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQN--GSLVSVSGTAVKTRR
8SAM-T991vr4A0.5440.9635.002threading_8MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVRDG--MLMVAVSGTAVRI--
9MUSTER1vr4A0.5440.9632.977threading_9MIVTTTSGIQGKEIIEYIDIVNGEAIMGANIVRDLFASVRDVVGGRAGSYESKLKEARDIAMDEMKELAKQKGANAIVGVDVDYEVVRDG--MLMVAVSGTAVRI--
10SPARKS3qkba0.2240.7941.160threading_10I---TTEGINAG--YTIKDVVEATSSL---LASEDIDKY-------------NFDQLFDEAKQKLKKKADLLEGDGIIGLKYNTEVVEVNGAFLVVHGYGTVILID-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.956 to 1y2iA
SCOP code=d.230.5.1
TM-score=0.955 to 1vr4A
SCOP code=d.230.5.1
TM-score=0.956 to 1y2iA
SCOP code=d.230.5.1
TM-score=0.944 to 1vr4A
SCOP code=d.230.5.1
TM-score=0.955 to 1vr4A
SCOP code=d.230.5.1